Regulatory Activity

QHistone predicts the possible regulatory activity of two queries (e.g., two protein ChIP-seqs) being functional consistency or opposite, by comparing their epigenome profiles.
Output consists of (1) Query information (2) Regulatory activity (3) Percent Overlap between histone modifications/variants and query (4) Expression analysis (5) PCA/tSNE/MDS (6) Genome browser (7) Gene ontology analysis.

Name of the first input query

Input genomic regions OR list of Gene IDs OR list of transposable element (TE) IDs OR Protein Lib ID *Search protein lib. id here.
[Load Demo BED] [Load Demo Genes] [Load Demo TEs] [Load Demo Lib1] [Load Demo SDG2] [Load Demo IBM1] [Load Demo CLF] [Clear]

Or upload BED file (for genomic regions) / TXT file (for Gene IDs and TE IDs):
Filename Extension: .narrowPeak, .bed, .txt, file size limit: 1 MB, file name limit 25 char

Limit genomic regions on genes or TEs

No limit

Genes

TEs

Name of the second input query

Input genomic regions OR list of Gene IDs OR list of transposable element (TE) IDs OR Protein Lib ID
[Load Demo BED] [Load Demo Genes] [Load Demo TEs] [Load Demo Lib2] [Load Demo S2Lb] [Load Demo LDL1] [Load Demo SWN] [Clear]

Or upload BED file (for genomic regions) / TXT file (for Gene IDs and TE IDs):
Filename Extension: .narrowPeak, .bed, .txt, file size limit: 1 MB, file name limit 25 char

limit genomic regions on Genes or TEs

No limit

Genes

TEs

Advanced options for SVM model and Gene-Ontology